2008

Peer-reviewed

Journal Articles
  1. Bridging Coarse-grained Models by Jump-in-sample Simulation, Xin, Z.; Jiang, Y.; Rasmussen, S. and Ziock, H., Journal of Chemical Physics, vol. 128, pp 174107-1-7 (2008).
  2. Metabolic Photo-fragmentation Kinetics for a Minimal Protocell: Rate-limiting Factors, Efficiency and Implications for Evolution. Knutson, C.; Benko, G.; Rocheleau, T.; Mouffouk, F.; Maselko, J.; Chen, L.; Shreve, A.P. & Rasmussen, S. Artificial Life, Vol. 14, no. 2 (pp 189-201) (2008)
  3. Application of Free Energy Pertubation Approach for Calculating Adsorption Energy of Small PNA Molecules at Lipid-Water Interface. Weronski, P; Yiang, Y and Rasmussen, S. Biophysical Journal, Vol. 92, pp 3081-3091 (2008)
  4. Metal-ion Catalyzed Polymerization in the Eutectic Phase in Water-Ice: A Possible Approach to Template-directed RNA Polymerization. Monnard, P.-A. & Szostak, J.W. Journal of Inorganic Biochemistry. Vol. 102, pp 1104-1111 (PR) (2008)
  5. Eutectic Phase in Water-ice: A Self-assembled Environment Conducive to Metalcatalyzed non-enzymatic RNA Polymerization. Monnard, P.-A. & Ziock, H.J. Chemistry & Biodiversity. Vol. 5, no. 8, pp 1521-1539 (2008)
  6. Organic Nano-compartments as Biometric Reactors and Protocells. Monnard, P.-A.; Ziock, H.J. & DeClue, M.S.. Nanoscience. Vol. 4, pp 71-87 (2008)
  7. Application of Molecular Dynamics Computer Simulations in the Design of a Minimal Self-Replicating Molecular Machine. Weronski, P. Yiang, Y. and Rasmussen, S. Complexity 13, pp 10-17 (2008)
  8. Genetic algorithms predict formation of exotic ordered phases for two-component dipolar monolayers, J. Fornleitner, Federica Lo Verso, G. Kahl and C. N. Likos, Soft Matter 4, 480-4 84 (2008) 
  9. An investigation of critical and noncritical correlations in model colloidal suspensions, D. Pini, A. Parola, L. Reatto, Federica Lo Verso, M. Tau,  Journal of Physics: Condensed Matter 20, 494246-494252 (2008) Feature Article Highlighted at the cover page of the Journal 
  10. End-functionalized polymers: versatile blocks for soft materials, Federica Lo Verso, C. N. Likos, Polymer 49, 1425-1434 (2008)

     

Book Chapters
  1. The Early History of Protocells - the search for the recipe of life. Hanczyc, M.M., In: Protocells: Bridging Nonliving and Living Matter / eds. Rasmussen, S.; Bedau, M. A.; Chen, L.; Deamer, D.; Krakauer, D.C.; Packard, N.H.; Stadler, P.F. MIT Press, November 2008.
  2. Steps toward a Synthetic Protocell. Hanczyc, M.M.; Chen, I.A.; Sazani; P.L.; Szostak, J.W.,In: Protocells: Bridging Nonliving and Living Matter / eds. Rasmussen, S.; Bedau, M.A.; Chen, L.; Deamer, D.; Krakauer, D.C.; Packard, N.H.; Stadler, P.F. MIT Press, November 2008.
  3. The Dawn of the RNA-world: non-enzymatic RNA polymerization from monoribonucleotides under prebiotically plausible conditions. Monnard, P.-A., In: Prebiotic Evolution and Astrobiology / eds. A. Lazcano; J.T.F. Wong. Landes Bioscience, TX (2008).
  4. Assembly of a Minimal Protocell. Rasmussen, S.; Bailey, J.; Boncella, J.; Chen, L.; Collis, G.; Colgate, S.; DeClue, M.; Fellermann, H.; Goranovič, G.; Jiang, Y.; Knutson, C.; Monnard, P.-A.; Mouffouk, F.; Nielson, M.; Sen, A.; Shreve, A.; Tamulis, A.; Travis, B.; Weronski, P.; Zhang, J.; Zhou, X.; Ziock, H.; Woodruff, W. In: Protocells: Bridging Nonliving and Living Matter / eds. Rasmussen, S.; Bedau, M.A.; Chen, L.; Deamer, D.; Krakauer, D.C.; Packard, N.H.; Stadler, P.F. MIT Press, November 2008.
  5. Models of Protocell Replication, Solé, R.V.; Sardanyes, J., Fellermann, H.; Valverde, S., J. Macia, and Munteanu, A. In: Protocells: Bridging Nonliving and Living Matter / eds. Rasmussen, S.; Bedau, M.A.; Chen, L.; Deamer, D.; Krakauer, D.C.; Packard, N.H.; Stadler, P.F. MIT Press (2008).
  6. Chapter 2 (pp 9-28) in Multiscale Simulation Methods for Nanomaterials, A. Tamulis, V. Tamulis, H. Ziock, S. Rasmussen, Ed. R. Ross & S. Mohanty, John Wiley & Sons, Inc. (2008).
  7. A Roadmap to Protocells. Rasmussen, S. ; Bedau, M.; McCaskill, J. S. & Packard, N. In: Protocells: Bridging Nonliving and Living Matter / eds. Rasmussen, S.; Bedau, M. A.; Chen, L.; Deamer, D.; Krakauer, D.C.; Packard, N.H.; Stadler, P.F. MIT Press, November 2008.
Contributions to Conference Proceedings
  1. Corporate Social Responsibility in the Energy Sector and Climate Change. / Rasmussen, S.; Mangalagiu, D.; Ziock, H. In: 2008 Academy of Management Annual Meeting, Anaheim, California, USA. August 8 - July 13 (2008)
  2. How Do European and U.S. Energy Sectors Address Climate Change? / Mangalagiu, D.; Rasmussen, S. & Ziock, H. International Energy Workshop, Paris, France (2008)
Non-peer-reviewed

Invited Articles and Contributed Encyclopedias

  1. How Do European and U.S. Energy Sectors Address Climate Change? Mangalagiu, D.; Rasmussen, S. & Ziock, H. (Los Alamos National Laboratory Report, LA-UR 08-0707) (2008).
  2. Seeing the net for the nodes: Coarse-graining modular Boolean networks. Fellermann, H.; Davidich, M. (Santa Fe Institute report) (2008).
Books and Book Chapters
  1. Protocells: Bridging Nonliving and Living Matter. / eds. Rasmussen, S.; Bedau, M. A.; Chen, L.; Deamer, D.; Krakauer, D.C.; Packard, N.H.; Stadler, P.F. MIT Press, November 2008.
  2. Initiativ for videnskab, teknologi og policy. Rasmussen, S. & Mangalagiu, D. In: Viljen til visdom / eds. Ole G. Mouritsen [et al.] (2008).
  3. Conference Proceeding Papers
  4. A system Exhibiting Darwinian Evolution. / Goranovič, G., Conference: Chembiogenesis 2008, Marathea, Italy, October 8 - October 10 (2008)