2010

Peer-reviewed

Journal Articles
  1. Automated Discovery of Novel Drug Formulations Using Predictive Iterated High Throughput Experimentation. / Caschera, F.; Gazzola, G.; Bedau, M.; Bosch Moreno, C.; Buchanon, A.; Cawse, J.; Packard, N. & Hanczyc, M., In: PLoS ONE. 5,1, pp. e8546. 8pp (2010).
  2. Turning on Resonant SERRS Using the Chromophore-Plasmon Coupling Created by Host-Guest Complexation at a Plasmonic Nanoarray. / Witlicki, E. H.; Andersen, S. S..; Hansen, S. W.; Jeppesen, J. O.; Wong, E. W.; Jensen, L. & Flood, A. H. Journal of the American Chemical Society, Vol. 132, No. 17 (2010)
  3. DNA-Mediated Self-Assembly of Artificial Vesicles. / Hadorn, M. & Eggenberger, Hotz P. PLoS One 5 5(3):e9886 (2010)
  4. Detection of Association and Fusion of Giant Vesicles Using a Fluorescence-Activated Cell Sorter. / Sunami, T.; Caschera, F.; Morita, Y.; Toyota, T.; Nishimura, K.; Matsuura, T.; Suziki, H.; Hanczyc, M. & Yomo, T.. In: Langmuir. 26, 19, pp. 15098 – 15103 (2010).
  5. Life after the Synthetic Cell. / Rasmussen, S. In: Nature, vol. 465 (7297), p. 422 (2010)
  6. Reactivity and Fusion between Cationic Vesicles and Fatty Acid Anionic Vesicles. / Caschera, F.; Stano, P. & Luisi, P. L. In: Journal of Colloid and Interface Science, vol. 343(2) (2010)
  7. Chemical Basis for Minimal Cognition. / Hanczyc, M. & Ikegami, T. Artificial life Vol. 16 (3): 233-243 (2010)
  8. Stress Relaxation in Entangled Polymer Melts. / Hou, J.-X.; Svaneborg, C.; Everaers, R. & Grest, G.S. Physical Review Letters, Vol. 105, 068301 (2010)
  9. Living Technology: Exploring Life´s Principles in Technology. / Bedau, M.; McCaskill, J.S.; Packard, N. & Rasmussen, S. Artificial Life, Vol. 16, pp 9 (2010)
  10. Positive Homotrophic Allosteric Receptors for Neutral Guests: Annulated TetrathifulvaleneCalix[4]pyrroles as Clorimetric Chemosensors for Nitroaromatic Explosives. / Park, J. S.; Le Derf, F.; Bejger, C. M.; Lynch, V. M.; Sessler, J. L.; Nielsen, K. A.; Johnsen, C. & Jeppesen, J. O. Chemistry: A European Journal, Vol. 16, No. 3, pp 848 - 858 (2010)
  11. Monnard, P.-A. / Guest Editor of Special Issue "Emergence in Chemical Systems" in Entropy (ISSN 1099-4300), 2010
  12. Phase behavior of lowfunctionality, telechelic star block copolymers, Federica Lo Verso, A. Z. Panagiotopoulos, C. N. Likos, Faraday Discussions 144, 143-157 (2010)
  13. Spherical Polymer Brushes Under Good Solvent Conditions: Molecular Dynamics Results Compared to Density Functional Theory, Federica Lo Verso, S. A. Egorov, A. Milchev, K. Binder, Journal of Chemical Physics 133, 184901/1-184901/10, (2010) 
Books
  1. Living Technology: 5 Questions. Bedau, M.; Hansen, P.G.; Parke, E. & Rasmussen, S. Automatic Press / VIP. p 236 (2010)

Book Chapters
  1. Wet artificial life: the creation of artificial living systems. Fellermann, H., In: H. Meyer-Ortmanns and S. Turner (eds.) Principles of Evolution. Springer (2010).
  2. Chapter 7 in the Living Technology: 5 Questions (on Martin Hanczyc) (2010)
  3. Chapter 14 in the Living Technology: 5 Questions (Steen Rasmussen) (2010)
  4. Integration of Primitive Metabolic, Genetic and Structural Protocell Components under Simulated Early Earth Conditions. Maurer, S.E. & Monnard, P.-A. Astrobiology: Physical Origin, Biological Evolution and Spatial Distribution (pp 59-79). Nova Science Publishers, Inc. (2010)

Contributions to Conference Proceedings
  1. Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. Edited by Fellermann, H.; Dörr, M.; Hanczyc, M.M.; Laursen, L. L.; Merkle, D.; Monnard, P.-A.; Støy, K. & Rasmussen, S. MIT Press (2010)
  2. Physically Grounded Simulations of a Self-Replicating Chemical Aggregate. / Fellermann, H. & Rasmussen, S. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  3. On the Interplay of Kinetics, Thermodynamics and Information in Simple Replicating Systems. / Corominas-Murtra, B.; Fellermann, H.; Solé, R. & Rasmussen, S. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  4. Attempt at a Systemic Design Linking Information, Metabolism and Container. / Maurer, S.E.; Albertsen, A.; Cape, J.; Boncella, J.M.; Spencer, L.; Ziock, H.-J.; Rasmussen, S. and P-A. Monnard. Designing a Protocell: In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  5. ’In Vitro’ and ’In Silico’ Complementary Studies on the Physical Properties of Prebiotic Compartments. / Piedraļ¬ta, G.; Shirt-Ediss, B.; Mavelli, F.; Monnard, P-A. & Ruiz-Mirazo K. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  6. Possible Role of Ice in the Synthesis of Polymeric Compounds. / Monnard, P-A.; Dörr, M. & Löffler, P. M. G. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  7. Designing a Protocell: Attempt at a Systemic Design linking Information, Metabolism and Container. / Maurer, S. E., Albertsen, A. N.; Cape, J.; Boncella, J. M., Spencer, L.; Ziock, H.; Rasmussen S. & Monnard P-A. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  8. Emergence of Self-Movement as a Precursor to Darwinian Evolution. / Hanczyc, M. & Ikegami, T. At: Origins of Life and Evolution of Biospheres (OLEB), 40. (2010)
Conference Abstracts/Extended Abstracts
  1. Physically Grounded Simulations of a Self-Replicating Chemical Aggregate. / Fellermann, H. & Rasmussen, S. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  2. Quantification of the Alongside Interactions in [2]Pseudotaxaners. / Hansen, S. W. & Jeppesen, J. O. @ 5th International Symposium on Macrocyclic and Supramolecular Chemistry (2010)
  3. Attempt at a Systemic Design Linking Information, Metabolism and Container. / Maurer, S.E.; Albertsen, A.; Cape, J.; Boncella, J.M.; Spencer, L.; Ziock, H.-J.; Rasmussen, S. and P.-A. Monnard. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  4. Mode Switching and Collective Behavior in Chemical Oil Droplets. / Horibe, N.; Kobayashi, K.; Hanczyc, M. & Ikegami, T. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  5. Possible Role of Ice in the Synthesis of Polymeric Compounds. / Monnard, P.; Dörr, M. & Löffler, P. M. G. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  6. Designing a Protocell: Attempt at a Systemic Design linking Information, Metabolism and Container. / Maurer, S. E., Albertsen, A. N.; Cape, J.; Boncella, J. M., Spencer, L.; Ziock, H.; Rasmussen S. & Monnard P. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  7. ’In Vitro’ and ’In Silico’ Complementary Studies on the Physical Properties of Prebiotic Compartments. / Piedrafita, G.; Shirt-Ediss, B.; Mavelli, F.; Monnard, P.-A. and Ruiz-Mirazo K. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  8. On the Interplay of Kinetics, Thermodynamics and Information in Simple Replicating Systems. / Corominas-Murtra, B.; Fellermann, H.; Solé, R. & Rasmussen, S. In: Proceedings of the 12th International Conference on Synthesis and Simulation of Artificial Life. MIT Press (2010)
  9. Emergence of Self-Movement as a Precursor to Darwinian Evolution. / Hanczyc, M. & Ikegami, T. At: Origins of Life and Evolution of Biospheres (OLEB), 40. (2010)

Posters
  1. Flow-E: a microbial flow inducer. iGEM SDU team 2010. iGEM November 6-8 2010, MIT Cambridge, USA (2010)
  2. Knitting a Protocell. / Maurer, S.E. The 12th International Conference on Synthesis and Simulation of Artificial Life (AlifeXII) (2010)
  3. Using LEGO Mindstorm to create an affordable open-source liquid handling robot. / Barnkob, M.S. and Hanczyc M.M. The 12th International Conference on Synthesis and Simulation of Artificial Life (AlifeXII) (2010)
  4. Quantification of the Alongside Interactions in [2]Pseudotaxaners. / Hansen, S. W. & Jeppesen, J. O. @ 5th International Symposium on Macrocyclic and Supramolecular Chemistry (2010)

Non-peer-reviewed

Invited Articles and Contributed Encyclopedias

  1. Sizing up the synthetic cell. / S. Rasmussen. Nature News (May 2010)
  2. Synthetic Genome. / S. Rasmussen. AstroBiology Magazine (May 2010)
  3. Acid hydrolysis. / Dörr, M. Enzyclopedia of Astrobiology. Springer (2010)
  4. Affinity chromatography. / Dörr, M. Enzyclopedia of Astrobiology. Springer (2010)
  5. Aminobutyric acid. / Dörr, M. Enzyclopedia of Astrobiology. Springer (2010)
  6. Deuterium. / Dörr, M. Enzyclopedia of Astrobiology. Springer (2010)
  7. Ion exchange chromotagraphy. / Dörr, M. Enzyclopedia of Astrobiology. Springer (2010)
  8. Ornithine. / Dörr, M. Enzyclopedia of Astrobiology. Springer (2010)
  9. Pyrolysis. / Dörr, M. Enzyclopedia of Astrobiology. Springer (2010)
  10. Sublimation. / Dörr, M. Enzyclopedia of Astrobiology. Springer (2010)
  11. Template-directed synthesis / Monnard P.-A. Encyclopedia of Astrobiology, Springer Science.

Posters
  1. Lab-On-Chip Flow Cytometry. / Radziwon, M. J.; Hoyland, J.; Kunstmann-Olsen, C.; Rubahn, H.-G. @ Poster session at Advanced Materials and Technologies, Palanga, Litauen (2010)